STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1P8P1_AMBTCUncharacterized protein. (120 aa)    
Predicted Functional Partners:
U5D1J4_AMBTC
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
 0.969
W1PTA3_AMBTC
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
 0.969
U5D5D2_AMBTC
Uncharacterized protein.
   
 
 0.900
W1PUS7_AMBTC
Uncharacterized protein.
      
 0.567
W1PY07_AMBTC
Uncharacterized protein.
   
  
 0.554
W1PMA5_AMBTC
BHLH domain-containing protein.
      
 0.536
U5D332_AMBTC
Uncharacterized protein; Belongs to the peptidase S8 family.
      
 0.535
W1P4D2_AMBTC
BHLH domain-containing protein.
      
 0.535
W1NHM3_AMBTC
Protein kinase domain-containing protein.
      
 0.530
W1P1K3_AMBTC
Uncharacterized protein.
      
 0.461
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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