STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PBQ6_AMBTCWD_REPEATS_REGION domain-containing protein. (115 aa)    
Predicted Functional Partners:
W1PIM7_AMBTC
WD_REPEATS_REGION domain-containing protein.
    
 0.977
W1PAA3_AMBTC
Uncharacterized protein.
    
 0.962
W1NKT5_AMBTC
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
   
 0.942
W1NXI1_AMBTC
Uncharacterized protein.
    
 0.919
U5D8D2_AMBTC
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.913
W1PYI1_AMBTC
Uncharacterized protein.
   
 0.913
W1P9F3_AMBTC
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.863
W1PSM7_AMBTC
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.863
W1NZ55_AMBTC
Peptidylprolyl isomerase.
    
 
 0.814
U5DEE8_AMBTC
ATG11 domain-containing protein.
     
 0.798
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.