STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PH63_AMBTCUncharacterized protein. (532 aa)    
Predicted Functional Partners:
W1PSL1_AMBTC
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.980
W1NR26_AMBTC
Uncharacterized protein.
    
 0.959
W1NLF0_AMBTC
Uncharacterized protein.
    
 0.954
W1PHM9_AMBTC
Uncharacterized protein.
    
 0.954
U5DEE8_AMBTC
ATG11 domain-containing protein.
    
 0.935
W1PH68_AMBTC
Uncharacterized protein.
     
 
0.900
W1NZN9_AMBTC
Autophagy-related protein 3.
   
 0.838
W1PI49_AMBTC
WD_REPEATS_REGION domain-containing protein.
    
 0.829
W1PMJ9_AMBTC
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.
   
 0.823
W1NI47_AMBTC
Protein kinase domain-containing protein.
    
 0.819
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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