STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PKQ1_AMBTCGrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. (274 aa)    
Predicted Functional Partners:
U5DEB7_AMBTC
Tim44 domain-containing protein.
   
 0.872
W1PKW1_AMBTC
Uncharacterized protein.
   
 0.849
U5DCI6_AMBTC
Uncharacterized protein; Belongs to the heat shock protein 70 family.
  
 0.759
W1P7N4_AMBTC
Uncharacterized protein.
  
 0.759
W1P987_AMBTC
Uncharacterized protein.
   
 0.759
U5D1T1_AMBTC
Uncharacterized protein.
     
 0.741
W1Q140_AMBTC
Uncharacterized protein.
   
 
 0.719
W1PN49_AMBTC
J domain-containing protein.
   
 0.718
W1P6R0_AMBTC
Uncharacterized protein; Belongs to the GroES chaperonin family.
  
 
 0.717
U5D8E8_AMBTC
Uncharacterized protein.
   
 0.701
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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