STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PKS1_AMBTCPNP_UDP_1 domain-containing protein. (332 aa)    
Predicted Functional Partners:
W1NES7_AMBTC
Pribosyltran domain-containing protein.
   
 0.691
W1P4H9_AMBTC
Pribosyltran domain-containing protein.
   
 0.691
U5DG81_AMBTC
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the N-terminal section; belongs to the aldolase class II family. MtnB subfamily.
     
 0.684
W1PE99_AMBTC
Amidohydro-rel domain-containing protein.
    
 0.624
W1PTT1_AMBTC
PALP domain-containing protein.
    
 0.624
W1P1Y3_AMBTC
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
  0.598
U5DGJ5_AMBTC
Uncharacterized protein.
  
 
 0.592
W1P1C2_AMBTC
A_deaminase domain-containing protein.
  
 
 0.592
W1PCG3_AMBTC
A_deaminase domain-containing protein.
  
 
 0.592
W1PPK0_AMBTC
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
     
 0.589
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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