STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PNR6_AMBTCUncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (286 aa)    
Predicted Functional Partners:
W1PJ72_AMBTC
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
   
 
 0.486
W1NIE1_AMBTC
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.463
W1PQY1_AMBTC
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.463
W1NPN2_AMBTC
Uncharacterized protein.
   
 0.446
U5CWI8_AMBTC
Uncharacterized protein; Belongs to the FGGY kinase family.
  
 
 0.431
U5DD63_AMBTC
Bromo domain-containing protein.
  
 
 0.431
W1NGI5_AMBTC
PPC domain-containing protein.
  
 
 0.431
KATNA1
Katanin p60 ATPase-containing subunit A1; Severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
  
 
 0.431
W1NR58_AMBTC
Uncharacterized protein.
  
 
 0.431
W1NVS3_AMBTC
AAA domain-containing protein; Belongs to the AAA ATPase family.
  
 
 0.431
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.