STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PRE9_AMBTCATP-grasp domain-containing protein. (635 aa)    
Predicted Functional Partners:
W1NZV7_AMBTC
Uncharacterized protein.
 
 0.995
W1PTS2_AMBTC
ATP-grasp domain-containing protein.
 0.991
W1P8B0_AMBTC
Glutamine amidotransferase type-2 domain-containing protein.
 
 0.983
W1PHG5_AMBTC
Glutamine amidotransferase type-1 domain-containing protein.
  
 0.979
W1NFM4_AMBTC
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 0.946
W1PGS5_AMBTC
Uncharacterized protein.
  
 0.946
W1PIM8_AMBTC
Formyl_trans_N domain-containing protein.
 
 0.945
W1P7I0_AMBTC
SAICAR_synt domain-containing protein.
   
 
 0.931
W1P1F6_AMBTC
Formyl_trans_N domain-containing protein.
  
 0.929
U5D392_AMBTC
MGS domain-containing protein.
 
 
 0.921
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.