STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W1PUM4_AMBTCGlutamine amidotransferase type-1 domain-containing protein. (284 aa)    
Predicted Functional Partners:
W1P3X2_AMBTC
Uncharacterized protein.
 
 0.999
W1PIF1_AMBTC
Uncharacterized protein.
 0.999
W1P1T7_AMBTC
Chorismate_bind domain-containing protein.
 
 0.995
W1PCY2_AMBTC
MR_MLE domain-containing protein.
  
 0.994
W1PWD6_AMBTC
Glutamine amidotransferase type-1 domain-containing protein.
 
0.992
U5D9Q0_AMBTC
IGPS domain-containing protein.
 
 
 0.990
W1P9B3_AMBTC
PRAI domain-containing protein.
 
 
 0.988
U5D139_AMBTC
Chorismate synthase.
  
 
 0.983
U5DBG0_AMBTC
Tryptophan synthase.
 
 
 0.961
W1P1K6_AMBTC
Uncharacterized protein; Belongs to the TrpA family.
 
 
 0.944
Your Current Organism:
Amborella trichopoda
NCBI taxonomy Id: 13333
Other names: A. trichopoda, Amborella trichopoda Baill.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.