STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2A_2569FAD dependent oxidoreductase. (426 aa)    
Predicted Functional Partners:
M2A_2223
Glutamate synthase.
  
 
 0.882
M2A_0174
Glutamate--putrescine ligase; Belongs to the glutamine synthetase family.
 
 
 0.876
M2A_1531
Glycine cleavage system T protein.
  
 0.859
M2A_1677
Glycine cleavage T protein (aminomethyl transferase); Belongs to the GcvT family.
  
 0.859
M2A_1683
Glutamine synthetase catalytic region.
 
 
 0.859
M2A_3061
Glutamate--putrescine ligase; Belongs to the glutamine synthetase family.
 
 
 0.858
M2A_0175
Putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
   
 0.753
M2A_0166
Pyrrolo-quinoline quinone.
     
 0.727
M2A_0173
Peptidase C26.
 
  
 0.710
M2A_3248
Zinc finger CDGSH-type domain protein.
    
 0.631
Your Current Organism:
Tepidicaulis marinus
NCBI taxonomy Id: 1333998
Other names: DSM 27167, NBRC 109643, T. marinus, Tepidicaulis marinus Takeuchi et al. 2015, alpha proteobacterium MA2, strain MA2
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