STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g2653Vacuolar protein sorting-associated protein 26B-like. (122 aa)    
Predicted Functional Partners:
AYI70_g1763
Vacuolar protein sorting-associated protein 35.
   
 0.999
AYI70_g5505
Vacuolar protein sorting-associated protein vps5.
   
 
 0.988
AYI70_g5276
Sorting nexin-3.
    
 0.987
AYI70_g2561
Sorting nexin-3.
    
 0.987
AYI70_g11193
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 0.983
AYI70_g9764
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 0.983
AYI70_g4710
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 0.983
AYI70_g10308
Vacuolar protein sorting-associated protein 17.
    
 
 0.932
AYI70_g11776
Sorting nexin-4.
    
 
 0.755
AYI70_g8625
Sorting nexin-4.
    
 
 0.755
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.