STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g1398U4/U6.U5 tri-snRNP-associated protein 2. (614 aa)    
Predicted Functional Partners:
AYI70_g1896
U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein.
   
 0.955
AYI70_g3887
U4/U6.U5 tri-snRNP-associated protein snu66.
    
 0.955
AYI70_g9102
U5 small nuclear ribonucleoprotein 40 kDa protein.
   
 0.948
AYI70_g10268
U4/U6 small nuclear ribonucleoprotein Prp31.
    
 0.942
AYI70_g1589
Putative ATP-dependent RNA helicase DDX23.
   
 0.925
AYI70_g7968
U4/U6 small nuclear ribonucleoprotein Prp4.
    
 0.923
AYI70_g6953
U4/U6 small nuclear ribonucleoprotein Prp3.
   
 0.911
AYI70_g5097
Pre-mRNA-processing-splicing factor 8.
   
 0.875
AYI70_g1316
Pre-mRNA-processing-splicing factor 8.
   
 0.875
AYI70_g4
Sm-like protein LSM7.
    
  0.867
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.