STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYI70_g86850S ribosomal protein L31. (104 aa)    
Predicted Functional Partners:
AYI70_g29
54S ribosomal protein L23, mitochondrial.
   
 
 0.984
AYI70_g8988
50S ribosomal protein L3-2, chloroplastic.
   
 
 0.983
AYI70_g11023
54S ribosomal protein L17, mitochondrial.
   
 
 0.982
AYI70_g4388
54S ribosomal protein L35, mitochondrial.
   
 
 0.981
AYI70_g11755
50S ribosomal protein L4.
   
 
 0.979
AYI70_g2299
54S ribosomal protein L10, mitochondrial.
   
   0.978
AYI70_g11902
39S ribosomal protein L47, mitochondrial.
   
 
 0.977
AYI70_g5202
Putative 54S ribosomal protein L7, mitochondrial.
   
 
 0.975
AYI70_g4153
50S ribosomal protein L19.
   
 
 0.974
AYI70_g3090
Ribosomal_L30 domain-containing protein.
   
 
 0.974
Your Current Organism:
Smittium culicis
NCBI taxonomy Id: 133412
Other names: S. culicis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.