STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_14891E3 ubiquitin-protein ligase TRIM23; Belongs to the small GTPase superfamily. Arf family. (229 aa)    
Predicted Functional Partners:
Avbf_11365
Leucine-rich repeat serine/threonine-protein kinase 1.
  
 0.984
Avbf_05005
Leucine-rich repeat serine/threonine-protein kinase 1.
  
 0.984
Avbf_04928
Intersectin-2.
    
 0.982
Avbf_09211
Cyclin-G-associated kinase.
    
 0.982
Avbf_01845
CAVP-target protein.
   
 0.957
Avbf_11798
Ubiquitin-40S ribosomal protein S27a.
   
 0.951
Avbf_04423
Uncharacterized protein.
   
 0.951
Avbf_03224
Unconventional myosin-IXa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.942
Avbf_01609
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1.
    
 0.941
Avbf_15762
ADP-ribosylation factor GTPase-activating protein GCS1.
   
 0.940
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.