STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_09965Protein HID1. (741 aa)    
Predicted Functional Partners:
Avbf_00817
Ubiquitin carboxyl-terminal hydrolase 7; Belongs to the peptidase C19 family.
    
 
 0.944
Avbf_06470
Nucleoporin GLE1.
   
 
 0.890
Avbf_07982
Ubiquitin carboxyl-terminal hydrolase 48; Belongs to the peptidase C19 family.
    
 
 0.867
Avbf_02896
Nuclear pore complex protein Nup54.
    
 
 0.860
Avbf_03519
Nuclear pore complex protein.
   
 
 0.857
Avbf_07768
Nuclear pore complex protein.
    
 
 0.856
Avbf_13734
mRNA export factor.
    
 
 0.839
Avbf_05770
Proliferation-associated protein 2G4.
    
   0.833
Avbf_11004
Nuclear RNA export factor 5.
    
 
 0.811
Avbf_11003
Nuclear RNA export factor 1.
    
 
 0.811
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.