STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_08327Dynamin-like protein, mitochondrial. (419 aa)    
Predicted Functional Partners:
Avbf_09211
Cyclin-G-associated kinase.
   
 0.994
Avbf_16402
Serine/threonine-protein kinase PINK1, mitochondrial.
    
 0.950
Avbf_08881
Clathrin heavy chain 1.
    
 0.948
Avbf_16401
Uncharacterized protein.
    
 0.947
Avbf_03769
Endophilin-A.
    
 0.947
Avbf_04928
Intersectin-2.
    
 
 0.945
Avbf_11445
IBR domain-containing protein.
    
 0.938
Avbf_11444
Uncharacterized protein.
    
 0.938
Avbf_11446
E3 ubiquitin-protein ligase parkin.
    
 0.938
Avbf_03132
Sorting nexin-18.
    
 0.934
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.