STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_18104Uncharacterized protein. (249 aa)    
Predicted Functional Partners:
Avbf_07962
Serum response factor-like protein.
    
 0.812
Avbf_09348
Uncharacterized protein.
    
 0.786
Avbf_07728
GATA-binding factor 5-B.
    
 0.786
Avbf_06173
Transcription factor 12.
    
 0.727
Avbf_16278
T-box transcription factor TBX1.
    
 
 0.716
Avbf_11731
Histone H4 transcription factor.
    
   0.689
Avbf_05552
Single-stranded DNA-binding protein 3.
    
 
 0.669
Avbf_13800
Nefa_Nip30_N domain-containing protein.
    
   0.649
Avbf_08152
Uncharacterized protein.
    
   0.649
Avbf_07424
MOB-like protein phocein.
    
   0.649
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.