STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_16261Uncharacterized protein. (159 aa)    
Predicted Functional Partners:
Avbf_07381
Axin-1.
    
 0.922
Avbf_14022
Reelin.
    
 0.892
Avbf_13923
Reelin.
    
 0.892
Avbf_13542
Basement membrane proteoglycan.
    
 0.881
Avbf_05228
Agrin.
    
 0.881
Avbf_01579
Basement membrane-specific heparan sulfate proteoglycan core protein.
    
 0.881
Avbf_06642
Alpha-2-macroglobulin receptor-associated protein.
    
 0.868
Avbf_12006
Protein eyes shut.
    
 0.863
Avbf_18766
Phosphatidylinositide phosphatase SAC1.
    
 0.800
Avbf_18765
Polyphosphatidylinositol phosphatase INP52.
    
 0.800
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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