STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_07728GATA-binding factor 5-B. (541 aa)    
Predicted Functional Partners:
Avbf_07962
Serum response factor-like protein.
    
 0.966
Avbf_01438
Nuclear transcription factor Y subunit gamma.
   
 
 0.952
Avbf_14264
Nuclear transcription factor Y subunit beta.
    
 
 0.939
Avbf_11505
Transcription factor AP-1.
    
 0.926
Avbf_02853
PHD finger protein 20-like protein 1.
   
 0.918
Avbf_04607
CREB-binding protein.
    
 0.917
Avbf_04577
CREB-binding protein.
    
 0.917
Avbf_19094
Silk gland factor 1.
  
 
 0.910
Avbf_12762
DUF4792 domain-containing protein.
   
 0.904
Avbf_13365
T-cell acute lymphocytic leukemia protein 1.
   
 0.904
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.