STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_04308Protein KTI12-like protein. (138 aa)    
Predicted Functional Partners:
Avbf_04992
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
   
 
 0.973
Avbf_11193
Putative elongator complex protein 2.
    
 
 0.946
Avbf_07149
Elongator complex protein 1.
    
 
 0.936
Avbf_07495
Elongator complex protein 5.
   
 
 0.932
Avbf_00405
Epsilon-sarcoglycan.
     
 0.896
Avbf_08165
Signal peptidase complex catalytic subunit SEC11.
     
 0.871
Avbf_17433
Lysyl-tRNA synthetase.
     
 0.829
Avbf_03083
Serine--tRNA ligase, mitochondrial.
     
 0.829
Avbf_11038
Serine--tRNA ligase, mitochondrial.
     
 0.829
Avbf_00406
Putative serine--tRNA ligase, cytoplasmic.
     
 0.829
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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