STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_3182Integral membrane sensor signal transduction histidine kinase. (597 aa)    
Predicted Functional Partners:
AKL17_3184
Two component, sigma54 specific, Fis family transcriptional regulator.
 0.992
AKL17_4585
Fis family transcriptional regulator.
 0.976
AKL17_0682
Hybrid histidine kinase.
 
0.925
AKL17_1856
Sensor protein.
  
  
 
0.925
AKL17_4584
Hypothetical protein.
  
  
 
0.917
AKL17_3183
Two component, sigma54 specific, fis family transcriptional regulator.
 
 
 0.863
AKL17_1855
Two component, sigma54 specific, fis family transcriptional regulator.
 
 0.778
AKL17_1269
Two-component hybrid sensor and regulator.
  
 
0.713
AKL17_0311
Response regulator receiver protein.
 
 
 0.612
AKL17_1649
Two component response regulator.
 
 0.571
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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