STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_4213Hypothetical protein. (281 aa)    
Predicted Functional Partners:
AKL17_4212
Hypothetical protein; Belongs to the UPF0301 (AlgH) family.
       0.723
AKL17_2499
Hypothetical protein.
  
     0.613
AKL17_0959
Heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
  
     0.547
AKL17_4588
HemY domain-containing protein.
  
     0.516
AKL17_1433
Peptidyl-prolyl cis-trans isomerase.
  
     0.513
AKL17_4636
DNA polymerase II.
  
     0.491
AKL17_2381
Chromosomal replication initiator, DnaA.
  
     0.476
AKL17_2955
XRE family transcriptional regulator.
  
     0.436
AKL17_0169
Hypothetical protein.
  
     0.419
AKL17_1824
Hypothetical protein.
  
     0.417
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.