STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000702445_00968Unannotated protein. (313 aa)    
Predicted Functional Partners:
GCA_000702445_00970
Unannotated protein.
    
  0.811
GCA_000702445_00971
Unannotated protein.
    
 0.789
GCA_000702445_01421
Unannotated protein.
  
 
 0.782
GCA_000702445_00969
Unannotated protein.
  
    0.775
GCA_000702445_01842
Unannotated protein.
  
 
 0.773
GCA_000702445_00743
Unannotated protein.
  
    0.762
GCA_000702445_02030
Unannotated protein.
   
 
 0.720
GCA_000702445_00972
Unannotated protein.
       0.709
GCA_000702445_00966
Unannotated protein.
       0.675
GCA_000702445_00967
Unannotated protein.
       0.675
Your Current Organism:
Bryobacter aggregatus
NCBI taxonomy Id: 1340493
Other names: Acidobacteria bacterium MPL3, B. aggregatus MPL3, Bryobacter aggregatus MPL3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.