STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000702445_02742Unannotated protein. (876 aa)    
Predicted Functional Partners:
GCA_000702445_04647
Unannotated protein.
  
 0.987
GCA_000702445_04257
Unannotated protein.
  
 
 0.942
GCA_000702445_00191
Unannotated protein.
  
  0.876
GCA_000702445_00842
Unannotated protein.
  
  0.876
GCA_000702445_01329
Unannotated protein.
  
  0.876
GCA_000702445_01375
Unannotated protein.
  
  0.876
GCA_000702445_04488
Unannotated protein.
 
 0.861
GCA_000702445_00841
Unannotated protein.
  
 0.847
GCA_000702445_02739
Unannotated protein.
  
    0.774
GCA_000702445_02740
Unannotated protein.
       0.773
Your Current Organism:
Bryobacter aggregatus
NCBI taxonomy Id: 1340493
Other names: Acidobacteria bacterium MPL3, B. aggregatus MPL3, Bryobacter aggregatus MPL3
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