STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGP53770.1Xyloglucanase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (772 aa)    
Predicted Functional Partners:
AGP57632.1
Cellulose 1,4-beta-cellobiosidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycosyl hydrolase family 6.
 
  
 0.828
AGP57635.1
Cellulose 1,4-beta-cellobiosidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.793
AGP53421.1
Endo-1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   
 0.765
AGP51836.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   
 0.764
AGP59268.1
Endo-1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   
 0.756
AGP56377.1
Endo-1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
     0.745
AGP54897.1
Pectate lyase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.729
AGP60628.1
Esterase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.722
AGP58065.1
Pectate lyase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.721
AGP60361.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.721
Your Current Organism:
Streptomyces rapamycinicus
NCBI taxonomy Id: 1343740
Other names: S. rapamycinicus NRRL 5491, Streptomyces rapamycinicus NRRL 5491
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