STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A138ZZU9Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (479 aa)    
Predicted Functional Partners:
A0A139ACW0
In the N-terminal section; belongs to the acetylglutamate kinase family.
     
 0.810
A0A139A9C7
Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.806
A0A139A5H1
Aldedh-domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 0.801
A0A139AK67
FAD dependent oxidoreductase.
  
 
 0.791
A0A139AR44
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.786
A0A139AU13
Aspartokinase.
    
 0.786
A0A139ABZ7
PLP-dependent transferase.
  
 0.785
A0A139AE41
Uncharacterized protein.
  
 
 0.784
A0A139ASQ3
Acyl-CoA N-acyltransferase.
    
 0.774
A0A139AQ44
Aspartate-semialdehyde dehydrogenase.
    
 0.772
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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