STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139A290Metallo-hydrolase/oxidoreductase. (238 aa)    
Predicted Functional Partners:
A0A139AE40
YTH domain-containing protein.
   
 0.981
A0A139AUW8
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.970
A0A139AJ40
CPSF_A domain-containing protein.
   
 0.955
A0A139A9N9
Ssu72 RNA polymerase II CTD phosphatase.
   
 0.954
A0A139AED9
WD40 repeat-like protein.
   
 0.954
A0A139A8Z5
WD40 repeat-like protein.
   
 0.952
A0A139AFU1
Symplekin_C domain-containing protein.
   
 0.951
A0A139A1M8
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 0.945
A0A139AS10
CID domain-containing protein.
    
 0.943
A0A139AA91
RRM domain-containing protein.
   
 0.929
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.