STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D2VHG5RING-type domain-containing protein. (780 aa)    
Predicted Functional Partners:
A0A1D2VLK8
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.995
A0A1D2VD35
Ubiquitin-domain-containing protein.
    
 0.964
A0A1D2VGP2
Ubiquitin.
    
 0.961
A0A1D2V9H8
Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.944
A0A1D2VLQ1
Ubiquitin-conjugating enzyme E2 4; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.943
A0A1D2VQ02
Uncharacterized protein.
    
  0.943
A0A1D2VM97
Ubiquitin-like domain-containing protein.
    
 0.933
A0A1D2V881
Putative an1-type zinc finger protein.
    
 0.924
A0A1D2VES7
Alternative oxidase.
   
 0.886
A0A1D2VCB5
Endosomal cargo receptor Erp3.
   
 0.881
Your Current Organism:
Ascoidea rubescens
NCBI taxonomy Id: 1344418
Other names: A. rubescens DSM 1968, Ascoidea rubescens DSM 1968
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