STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDG55262.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (346 aa)    
Predicted Functional Partners:
CDG52578.1
ATP synthase protein I.
  
     0.692
CDG55263.1
Tyrosine recombinase xerC; Belongs to the 'phage' integrase family.
 
     0.681
CDG54619.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.640
CDG52406.1
dTDP-4-dehydrorhamnose reductase.
  
     0.634
CDG54681.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.627
CDG55414.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.623
CDG51618.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.591
CDG55757.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.590
CDG55788.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.569
CDG55135.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.561
Your Current Organism:
Halomonas sp. A3H3
NCBI taxonomy Id: 1346287
Other names: H. sp. A3H3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.