STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2363methylmalonyl-CoA epimerase; Lactoylglutathione lyase and related lyases. (123 aa)    
Predicted Functional Partners:
tpo
Thyroid peroxidase; RTX toxins and related Ca2+-binding proteins.
  
     0.545
ACPL_2362
Hypothetical protein.
       0.527
yngE
propionyl-CoA carboxylase beta chain; Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
     
  0.499
ACPL_1521
propionyl-CoA carboxylase beta chain; Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
     
  0.499
icmA
Methylmalonyl-CoA mutase, N-terminal domain/subunit.
     
  0.499
dts2
Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
     
  0.499
accA
Biotin carboxylase.
     
  0.499
sbm5
Methylmalonyl-CoA mutase, N-terminal domain/subunit.
     
  0.499
ACPL_8105
propionyl-CoA carboxylase beta chain; Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
     
  0.499
mccA
propionyl-CoA carboxylase alpha chain; Biotin carboxylase.
     
  0.499
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.