STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_2434Hypothetical protein. (296 aa)    
Predicted Functional Partners:
ACPL_2435
Predicted transcriptional regulators.
 
     0.830
ACPL_2792
Predicted transcriptional regulators.
  
     0.688
ACPL_1735
Predicted transcriptional regulators.
  
     0.677
ACPL_540
Putative transcriptional regulator, ArsR family; Predicted transcriptional regulators.
  
     0.640
ACPL_8358
Secreted protein; Cell wall-associated hydrolases (invasion-associated proteins).
  
     0.635
ACPL_4317
Hypothetical protein; Predicted HD-superfamily hydrolase.
  
     0.609
ACPL_5978
Putative DNA-binding protein.
  
     0.523
ACPL_2436
Enoyl-CoA hydratase/carnithine racemase.
 
     0.517
ACPL_2158
Transcriptional regulator, MarR family.
  
     0.463
ACPL_8357
Capsule biosynthesis protein capC.
  
     0.453
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.