STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3820Hypothetical protein. (728 aa)    
Predicted Functional Partners:
ACPL_3822
Predicted transcriptional regulators.
 
     0.938
lolD
Spermidine/putrescine import ATP-binding protein potA; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
  
 0.884
ACPL_1693
Nucleotide binding protein 1; ATPases involved in chromosome partitioning.
  
     0.628
pdcA
Putative N-acetylmuramoyl-L-alanine amidase; Putative peptidoglycan-binding domain-containing protein.
       0.533
ACPL_3823
Uncharacterized protein conserved in bacteria.
       0.498
ACPL_376
Predicted transcriptional regulators.
 
     0.453
ACPL_4983
Hypothetical protein.
  
     0.449
ACPL_1496
Nephrocystin-3; FOG: TPR repeat.
  
     0.435
ACPL_6731
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
 
    0.432
ACPL_7159
Hypothetical protein; Kef-type K+ transport systems, predicted NAD-binding component.
  
     0.431
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.