STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4015Signal transduction protein; Predicted NTPase (NACHT family). (1174 aa)    
Predicted Functional Partners:
fn1
Fibronectin; RTX toxins and related Ca2+-binding proteins.
  
     0.744
ACPL_3706
Hypothetical protein.
  
     0.736
ACPL_298
Transposase B; Integrase.
  
     0.712
ACPL_5620
NADH-quinone oxidoreductase subunits H/I.
  
     0.608
ACPL_3352
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); FOG: GAF domain.
  
     0.601
ACPL_5841
Filamin-C.
  
     0.568
ACPL_3705
Hypothetical protein.
  
     0.548
ACPL_4016
Hypothetical protein.
       0.541
ACPL_5619
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
  
     0.537
griF
Tyrosinase.
  
     0.528
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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