STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
met-2Hepatocyte growth factor receptor; FOG: Ankyrin repeat. (503 aa)    
Predicted Functional Partners:
qcrC
Cytochrome c, mono- and diheme variants.
   
 
 0.641
ACPL_4503
Enoyl-CoA hydratase/carnithine racemase.
       0.613
ACPL_1282
Midasin; AAA ATPase containing von Willebrand factor type A (vWA) domain.
  
     0.549
rbp3
Retinol-binding protein 3; Periplasmic protease.
  
     0.509
ACPL_4502
HTH-type protein slmA; Transcriptional regulator.
       0.462
g7c
Protein G7c.
  
     0.416
ACPL_993
5-hydroxyisourate hydrolase; Transthyretin-like protein.
  
 
   0.414
galC-2
Galactosylceramidase; Beta-xylosidase.
  
     0.401
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.