STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
araA-2L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. (494 aa)    
Predicted Functional Partners:
araD
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
 
 
 0.979
abfA
alpha-N-arabinofuranosidase; Alpha-L-arabinofuranosidase.
 
 
 0.907
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
  
  
 
0.901
ACPL_5443
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
   
 0.839
ACPL_5442
Inner membrane ABC transporter permease protein YjfF; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
     
 0.815
ACPL_5444
Simple sugar transport system ATP-binding protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase.
  
  
 0.806
ACPL_2739
alpha-L-arabinofuranosidase B catalytic.
     
  0.800
ACPL_3607
ADP-L-glycero-D-manno-heptose-6-epimerase; Nucleoside-diphosphate-sugar epimerases.
     
  0.800
ACPL_4729
alpha-L-arabinofuranosidase B catalytic; O-Glycosyl hydrolase.
     
  0.800
ACPL_4741
Hypothetical protein.
     
  0.800
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.