STRINGSTRING
CDF79906.1 protein (Formosa agariphila) - STRING interaction network
"CDF79906.1" - 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase in Formosa agariphila
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDF79906.14-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; Belongs to the KduI family (280 aa)    
Predicted Functional Partners:
CDF79907.1
annotation not available (264 aa)
 
   
    0.989
CDF79908.1
annotation not available (390 aa)
              0.806
BN863_9410
annotation not available (275 aa)
       
    0.502
CDF79845.1
annotation not available (453 aa)
 
          0.434
Your Current Organism:
Formosa agariphila
NCBI taxonomy Id: 1347342
Other names: Bacteroidetes bacterium KMM 3901, F. agariphila KMM 3901, Formosa agariphila, Formosa agariphila KMM 3901
Server load: low (11%) [HD]