STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM51497.1Anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family. (141 aa)    
Predicted Functional Partners:
SHM24091.1
PAS/PAC sensor hybrid histidine kinase.
  
 0.996
SHN28980.1
GAF domain-containing protein.
 
 0.996
SHM59652.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
 
 
 0.976
SHN28973.1
sigma-B regulation protein RsbU (phosphoserine phosphatase).
 
 
 0.955
SHN02532.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
 0.947
SHM57610.1
Signal transduction histidine kinase.
 
 
 0.944
SHN75054.1
Signal transduction histidine kinase.
 
 
 0.931
SHN47482.1
PAS domain S-box-containing protein.
  
 
 0.916
SHN42695.1
PAS domain S-box-containing protein.
 
 0.912
SHN47159.1
sigma-B regulation protein RsbU (phosphoserine phosphatase).
 
 0.902
Your Current Organism:
Cryptosporangium aurantiacum
NCBI taxonomy Id: 134849
Other names: Actinoplanes aurantiacus, C. aurantiacum, DSM 46144, IFO 13967, IMET 9261, IMSNU 22120, JCM 3241, KCC A-0241, KCTC 9529, NBRC 13967, NCIMB 12649, NRRL B-16698, strain 71-C38
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