STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHN38619.1D-arabinose 1-dehydrogenase, Zn-dependent alcohol dehydrogenase family. (363 aa)    
Predicted Functional Partners:
SHM95506.1
Alcohol dehydrogenase, class IV.
  
 0.975
SHN43291.1
Putative phosphonate catabolism associated alcohol dehydrogenase.
 
 0.902
SHN16538.1
Aryl-alcohol dehydrogenase.
  
 
 0.879
SHN75847.1
Aryl-alcohol dehydrogenase.
  
 
 0.869
SHM91342.1
Aryl-alcohol dehydrogenase.
  
 
 0.868
SHN40152.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
  
 
 0.862
SHN47730.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
  
 
 0.861
SHN17358.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
  
 
 0.856
SHN46601.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
  
 
 0.855
SHN46197.1
PTS system, fructose subfamily, IIC component.
    
  0.853
Your Current Organism:
Cryptosporangium aurantiacum
NCBI taxonomy Id: 134849
Other names: Actinoplanes aurantiacus, C. aurantiacum, DSM 46144, IFO 13967, IMET 9261, IMSNU 22120, JCM 3241, KCC A-0241, KCTC 9529, NBRC 13967, NCIMB 12649, NRRL B-16698, strain 71-C38
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