STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GJA_160JagC. (3647 aa)    
Predicted Functional Partners:
GJA_1385
Putative uncharacterized protein.
 
 
 0.998
GJA_1389
PKS-NRPS ORF 2.
 
 
0.998
GJA_157
Putative uncharacterized domain protein.
 
 
 0.998
mbtH
Protein mbtH.
 
 
 0.998
GJA_1743
NRPS II ORF 3; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
0.998
mbtH-2
Protein mbtH; http://pfam.sanger.ac.uk/family/PF03621.7 'Many NRPS clusters include a small protein of approximately 80 amino acids with homology to the MbtH protein of mycobactin synthesis in Mycobacteria tuberculosis; no function has been assigned to these proteins' (The 1.8 A crystal structure of PA2412, an MbtH-like protein from the pyoverdine cluster of Pseudomonas aeruginosa. Drake EJ, Cao J, Qu J, Shah MB, Straubinger RM, Gulick AM).
 
 
 0.998
GJA_161
JagD.
 
 
0.995
GJA_158
JagA.
 
 
0.993
GJA_1388
PKS-NRPS ORF 1; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
0.990
GJA_1394
Alpha/beta hydrolase fold family protein.
 
  
 0.985
Your Current Organism:
Janthinobacterium agaricidamnosum
NCBI taxonomy Id: 1349767
Other names: J. agaricidamnosum NBRC 102515 = DSM 9628, Janthinobacterium agaricidamnosum DSM 9628, Janthinobacterium agaricidamnosum DSM 9628 = NBRC 102515, Janthinobacterium agaricidamnosum NBRC 102515, Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628
Server load: medium (70%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.