STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DT23_078602-octaprenyl-6-methoxyphenyl hydroxylase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (408 aa)    
Predicted Functional Partners:
ubiG
3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
 
 
 0.989
ubiE
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
  
 
 0.972
DT23_15405
2-octaprenyl-6-methoxyphenyl hydroxylase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 
0.901
ubiA
Hypothetical protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
  
  
 0.835
DT23_07855
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   0.721
gshB
Glutathione synthetase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the prokaryotic GSH synthase family.
  
     0.660
DT23_07850
Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.635
DT23_18375
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.611
DT23_16970
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.605
DT23_10520
Glutaredoxin; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glutaredoxin family. Monothiol subfamily.
  
     0.597
Your Current Organism:
Thioclava indica
NCBI taxonomy Id: 1353528
Other names: Albirhodobacter sp. MCCC 1A00513, KCTC 33533, LMG 27698, LMG:27698, MCCC 1A00513, T. indica, Thioclava indica Liu et al. 2015, Thioclava sp. DT23-4, Thioclava sp. MCCC 1A00513, strain DT23-4
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