STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000585115_00481Unannotated protein. (688 aa)    
Predicted Functional Partners:
GCA_000585115_00127
Unannotated protein.
   
 0.973
GCA_000585115_01308
Unannotated protein.
   
 0.950
GCA_000585115_01309
Unannotated protein.
   
 0.950
GCA_000585115_00146
Unannotated protein.
 
  0.942
GCA_000585115_02108
Unannotated protein.
  
  0.934
GCA_000585115_00747
Unannotated protein.
   
 0.902
GCA_000585115_00750
Unannotated protein.
   
   0.848
GCA_000585115_00742
Unannotated protein.
  
 
 0.847
GCA_000585115_01878
Unannotated protein.
   
   0.840
GCA_000585115_00147
Unannotated protein.
  
 
 0.830
Your Current Organism:
Arcobacter lanthieri
NCBI taxonomy Id: 1355374
Other names: A. lanthieri, Aliiarcobacter lanthieri, Arcobacter lanthieri Whiteduck-Leveillee et al. 2015, Arcobacter sp. AF1430, Arcobacter sp. AF1440, Arcobacter sp. AF1581, CCUG 66485, LMG 28516, LMG:28516, strain AF1440
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.