STRINGSTRING
CBN30912 protein (Caenorhabditis brenneri) - STRING interaction network
"CBN30912" - Uncharacterized protein in Caenorhabditis brenneri
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBN30912Uncharacterized protein (488 aa)    
Predicted Functional Partners:
CBN12473
Uncharacterized protein (840 aa)
           
  0.812
Cbn-hlh-30
CBN-HLH-30 protein (449 aa)
     
   
  0.806
CBN32822
Uncharacterized protein (375 aa)
       
 
  0.784
Cbn-lips-3
CBN-LIPS-3 protein (327 aa)
           
  0.780
CBN00337
Uncharacterized protein (445 aa)
           
  0.762
CBN20452
Uncharacterized protein (341 aa)
           
  0.761
Cbn-atgp-2
CBN-ATGP-2 protein (647 aa)
           
  0.720
CBN31730
Uncharacterized protein (551 aa)
           
  0.644
Cbn-aat-5
CBN-AAT-5 protein (548 aa)
           
  0.644
CBN24927
Uncharacterized protein (98 aa)
           
  0.630
Your Current Organism:
Caenorhabditis brenneri
NCBI taxonomy Id: 135651
Other names: C. brenneri, Caenorhabditis CB5161, Caenorhabditis brenneri, Caenorhabditis n. sp. CB5161, Caenorhabditis sp. 1 CB5161, Caenorhabditis sp. 4 (CB5161, LKC28, SB129, SB280), Caenorhabditis sp. 4 (CE-II), Caenorhabditis sp. CB5161, Caenorhabditis sp. PB2801
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