STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AII50454.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (243 aa)    
Predicted Functional Partners:
AII50455.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.998
AII52860.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.994
AII52377.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
   0.691
AII52676.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the anti-sigma-factor antagonist family.
   
   0.691
AII53114.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the anti-sigma-factor antagonist family.
   
   0.691
AII53158.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the anti-sigma-factor antagonist family.
   
   0.691
AII51933.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
  0.646
AII51567.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.607
AII53108.1
Hypothetical protein; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
    0.600
AII50453.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.597
Your Current Organism:
Hymenobacter sp. APR13
NCBI taxonomy Id: 1356852
Other names: H. sp. APR13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.