STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSLG_04225Uncharacterized protein. (344 aa)    
Predicted Functional Partners:
BSLG_03836
GFO_IDH_MocA domain-containing protein.
   
 
 0.632
BSLG_01938
Cystathionine beta-lyase.
 
    
 0.602
BSLG_05947
B2-adapt-app_C domain-containing protein.
    
  0.575
BSLG_03683
Adaptin_N domain-containing protein.
    
  0.575
BSLG_00737
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
  0.575
BSLG_08549
NADH-ubiquinone oxidoreductase chain 4.
    
   0.550
BSLG_07304
Adaptin_N domain-containing protein.
    
  0.550
BSLG_06918
Adaptin_N domain-containing protein.
    
  0.550
BSLG_03259
Adaptin_N domain-containing protein.
    
  0.550
BSLG_00263
AP-1 complex subunit gamma.
    
  0.550
Your Current Organism:
Batrachochytrium salamandrivorans
NCBI taxonomy Id: 1357716
Other names: AMFP13/1, B. salamandrivorans, Batrachochytrium salamandrivorans Martel, Blooi, Bossuyt & Pasmans 2013, CBS 135744, Chytridiales sp. AM-2013, Chytridiomycota sp. AM-2013
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