STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRA2ARRM domain-containing protein. (344 aa)    
Predicted Functional Partners:
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.881
SRSF1
Uncharacterized protein.
   
 0.867
SRSF7
Uncharacterized protein.
   
 0.819
SRSF10
Serine and arginine rich splicing factor 10.
   
 0.795
SRSF2
RRM domain-containing protein.
   
 0.766
ENSMODP00000042574
Uncharacterized protein.
   
 0.737
SRSF9
Serine and arginine rich splicing factor 9.
   
 0.694
PCBP2
Poly(rC) binding protein 2.
   
 0.666
SREK1
Splicing regulatory glutamic acid and lysine rich protein 1.
   
 0.638
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.636
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.