STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF608Zinc finger protein 608. (1511 aa)    
Predicted Functional Partners:
RCBTB2
RCC1 and BTB domain containing protein 2.
   
  
 0.598
RANBP3L
RAN binding protein 3 like.
      
 0.566
TUBGCP4
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
      
 0.562
ZBTB40
Zinc finger and BTB domain containing 40.
   
  
 0.501
ZNF532
Zinc finger protein 532.
   
  
 0.479
SHPRH
SNF2 histone linker PHD RING helicase.
   
  
 0.467
GRAMD2B
GRAM domain containing 2B.
      
 0.403
GALNT17
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.403
ZNF697
Zinc finger protein 697.
      
 0.403
GALNT9
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.403
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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