Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HDAC3 | PRDM4 | ENSMODP00000013319 | ENSMODP00000001757 | Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | PR/SET domain 4. | 0.469 |
LOC100024870 | PRDM4 | ENSMODP00000050988 | ENSMODP00000001757 | Uncharacterized protein. | PR/SET domain 4. | 0.529 |
NGFR | PRDM4 | ENSMODP00000039551 | ENSMODP00000001757 | Nerve growth factor receptor. | PR/SET domain 4. | 0.901 |
POLR3B | PRDM4 | ENSMODP00000002305 | ENSMODP00000001757 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | PR/SET domain 4. | 0.546 |
POLR3B | TMEM263 | ENSMODP00000002305 | ENSMODP00000001948 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transmembrane protein 263. | 0.581 |
PRDM4 | HDAC3 | ENSMODP00000001757 | ENSMODP00000013319 | PR/SET domain 4. | Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.469 |
PRDM4 | LOC100024870 | ENSMODP00000001757 | ENSMODP00000050988 | PR/SET domain 4. | Uncharacterized protein. | 0.529 |
PRDM4 | NGFR | ENSMODP00000001757 | ENSMODP00000039551 | PR/SET domain 4. | Nerve growth factor receptor. | 0.901 |
PRDM4 | POLR3B | ENSMODP00000001757 | ENSMODP00000002305 | PR/SET domain 4. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.546 |
PRDM4 | PRMT5 | ENSMODP00000001757 | ENSMODP00000006409 | PR/SET domain 4. | Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. | 0.579 |
PRDM4 | RPP38 | ENSMODP00000001757 | ENSMODP00000052994 | PR/SET domain 4. | Ribosomal_L7Ae domain-containing protein. | 0.471 |
PRDM4 | SH3RF3 | ENSMODP00000001757 | ENSMODP00000037158 | PR/SET domain 4. | SH3 domain containing ring finger 3. | 0.515 |
PRDM4 | SMYD4 | ENSMODP00000001757 | ENSMODP00000013204 | PR/SET domain 4. | SET and MYND domain containing 4. | 0.500 |
PRDM4 | TMEM263 | ENSMODP00000001757 | ENSMODP00000001948 | PR/SET domain 4. | Transmembrane protein 263. | 0.451 |
PRDM4 | VIPAS39 | ENSMODP00000001757 | ENSMODP00000006665 | PR/SET domain 4. | VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog. | 0.589 |
PRMT5 | PRDM4 | ENSMODP00000006409 | ENSMODP00000001757 | Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. | PR/SET domain 4. | 0.579 |
RPP38 | PRDM4 | ENSMODP00000052994 | ENSMODP00000001757 | Ribosomal_L7Ae domain-containing protein. | PR/SET domain 4. | 0.471 |
SH3RF3 | PRDM4 | ENSMODP00000037158 | ENSMODP00000001757 | SH3 domain containing ring finger 3. | PR/SET domain 4. | 0.515 |
SMYD4 | PRDM4 | ENSMODP00000013204 | ENSMODP00000001757 | SET and MYND domain containing 4. | PR/SET domain 4. | 0.500 |
TMEM263 | POLR3B | ENSMODP00000001948 | ENSMODP00000002305 | Transmembrane protein 263. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.581 |
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