STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSANTD1Myb/SANT DNA binding domain containing 1. (271 aa)    
Predicted Functional Partners:
SAP130
Sin3A associated protein 130.
      
 0.588
OSTM1
Osteoclastogenesis associated transmembrane protein 1.
      
 0.584
RCL1
RNA terminal phosphate cyclase like 1.
      
 0.571
SNUPN
Snurportin-1; Functions as an U snRNP-specific nuclear import adapter. Involved in the trimethylguanosine (m3G)-cap-dependent nuclear import of U snRNPs. Binds specifically to the terminal m3G-cap U snRNAs. Belongs to the snurportin family.
      
 0.548
CATSPER3
Cation channel sperm associated 3.
      
 0.545
SNX29
Sorting nexin 29.
      
 0.450
ESM1
Endothelial cell specific molecule 1.
  
     0.433
SMOC2
SPARC related modular calcium binding 2.
      
 0.410
OR52W1
Olfactory receptor family 52 subfamily W member 1; Belongs to the G-protein coupled receptor 1 family.
      
 0.404
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.