STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFAIP6TNF alpha induced protein 6. (277 aa)    
Predicted Functional Partners:
PTX3
Pentraxin 3.
   
 
 0.837
ENSMODP00000048395
Link domain-containing protein.
     
0.787
CXCL8
Multifunctional fusion protein; Belongs to the intercrine alpha (chemokine CxC) family.
   
 
 0.744
EREG
Epiregulin.
      
 0.741
HAS1
Hyaluronan synthase 1.
   
  
 0.676
FNTA
Farnesyltransferase, CAAX box, alpha.
      
 0.672
HAS2
Uncharacterized protein.
   
  
 0.670
HAS3
Hyaluronan synthase 3.
   
  
 0.667
IL6
Uncharacterized protein.
   
  
 0.636
TNF
Tumor necrosis factor; Belongs to the tumor necrosis factor family.
   
 
 0.613
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.