Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACP5 | TNFRSF11B | ENSMODP00000008319 | ENSMODP00000005003 | Tartrate-resistant acid phosphatase type 5. | TNF receptor superfamily member 11b. | 0.423 |
ACP5 | TNFSF11 | ENSMODP00000008319 | ENSMODP00000018584 | Tartrate-resistant acid phosphatase type 5. | Tumor necrosis factor ligand superfamily member. | 0.648 |
CD40LG | LTA | ENSMODP00000048298 | ENSMODP00000019688 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Lymphotoxin alpha; Belongs to the tumor necrosis factor family. | 0.605 |
CD40LG | LTB | ENSMODP00000048298 | ENSMODP00000019678 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Lymphotoxin beta; Belongs to the tumor necrosis factor family. | 0.516 |
CD40LG | TNFRSF11A | ENSMODP00000048298 | ENSMODP00000006243 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | TNFR-Cys domain-containing protein. | 0.493 |
CD40LG | TNFRSF11B | ENSMODP00000048298 | ENSMODP00000005003 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | TNF receptor superfamily member 11b. | 0.692 |
CD40LG | TNFSF11 | ENSMODP00000048298 | ENSMODP00000018584 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Tumor necrosis factor ligand superfamily member. | 0.525 |
CD40LG | TNFSF14 | ENSMODP00000048298 | ENSMODP00000032553 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | TNF superfamily member 14; Belongs to the tumor necrosis factor family. | 0.491 |
LTA | CD40LG | ENSMODP00000019688 | ENSMODP00000048298 | Lymphotoxin alpha; Belongs to the tumor necrosis factor family. | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | 0.605 |
LTA | LTB | ENSMODP00000019688 | ENSMODP00000019678 | Lymphotoxin alpha; Belongs to the tumor necrosis factor family. | Lymphotoxin beta; Belongs to the tumor necrosis factor family. | 0.997 |
LTA | TNFRSF11B | ENSMODP00000019688 | ENSMODP00000005003 | Lymphotoxin alpha; Belongs to the tumor necrosis factor family. | TNF receptor superfamily member 11b. | 0.520 |
LTA | TNFSF11 | ENSMODP00000019688 | ENSMODP00000018584 | Lymphotoxin alpha; Belongs to the tumor necrosis factor family. | Tumor necrosis factor ligand superfamily member. | 0.564 |
LTA | TNFSF14 | ENSMODP00000019688 | ENSMODP00000032553 | Lymphotoxin alpha; Belongs to the tumor necrosis factor family. | TNF superfamily member 14; Belongs to the tumor necrosis factor family. | 0.459 |
LTB | CD40LG | ENSMODP00000019678 | ENSMODP00000048298 | Lymphotoxin beta; Belongs to the tumor necrosis factor family. | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | 0.516 |
LTB | LTA | ENSMODP00000019678 | ENSMODP00000019688 | Lymphotoxin beta; Belongs to the tumor necrosis factor family. | Lymphotoxin alpha; Belongs to the tumor necrosis factor family. | 0.997 |
LTB | TNFRSF11B | ENSMODP00000019678 | ENSMODP00000005003 | Lymphotoxin beta; Belongs to the tumor necrosis factor family. | TNF receptor superfamily member 11b. | 0.507 |
LTB | TNFSF11 | ENSMODP00000019678 | ENSMODP00000018584 | Lymphotoxin beta; Belongs to the tumor necrosis factor family. | Tumor necrosis factor ligand superfamily member. | 0.476 |
LTB | TNFSF14 | ENSMODP00000019678 | ENSMODP00000032553 | Lymphotoxin beta; Belongs to the tumor necrosis factor family. | TNF superfamily member 14; Belongs to the tumor necrosis factor family. | 0.450 |
TGFB2 | TNFRSF11B | ENSMODP00000005302 | ENSMODP00000005003 | Transforming growth factor beta; Belongs to the TGF-beta family. | TNF receptor superfamily member 11b. | 0.543 |
TGFB2 | TNFSF11 | ENSMODP00000005302 | ENSMODP00000018584 | Transforming growth factor beta; Belongs to the TGF-beta family. | Tumor necrosis factor ligand superfamily member. | 0.552 |
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