STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF11BTNF receptor superfamily member 11b. (433 aa)    
Predicted Functional Partners:
TNFSF11
Tumor necrosis factor ligand superfamily member.
   
 0.998
CD40LG
CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching.
   
 0.692
TNFSF14
TNF superfamily member 14; Belongs to the tumor necrosis factor family.
   
 0.653
TNFSF15
TNF_2 domain-containing protein.
   
 0.641
TGFB2
Transforming growth factor beta; Belongs to the TGF-beta family.
   
  
 0.543
TNFRSF11A
TNFR-Cys domain-containing protein.
   
0.537
LTA
Lymphotoxin alpha; Belongs to the tumor necrosis factor family.
   
 0.520
LTB
Lymphotoxin beta; Belongs to the tumor necrosis factor family.
   
 0.507
ACP5
Tartrate-resistant acid phosphatase type 5.
   
  
 0.423
Your Current Organism:
Monodelphis domestica
NCBI taxonomy Id: 13616
Other names: gray short-tailed opossum
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