Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CST7 | MATN2 | ENSMODP00000053188 | ENSMODP00000055616 | Cystatin domain-containing protein. | Matrilin 2. | 0.489 |
DCN | LUM | ENSMODP00000012070 | ENSMODP00000012084 | Decorin; May affect the rate of fibrils formation. | Lumican. | 0.922 |
DCN | MATN2 | ENSMODP00000012070 | ENSMODP00000055616 | Decorin; May affect the rate of fibrils formation. | Matrilin 2. | 0.474 |
DKK1 | FZD6 | ENSMODP00000020512 | ENSMODP00000006959 | Dickkopf WNT signaling pathway inhibitor 1. | Frizzled class receptor 6; Belongs to the G-protein coupled receptor Fz/Smo family. | 0.411 |
DKK1 | MATN2 | ENSMODP00000020512 | ENSMODP00000055616 | Dickkopf WNT signaling pathway inhibitor 1. | Matrilin 2. | 0.541 |
ENSMODP00000049103 | MATN2 | ENSMODP00000049103 | ENSMODP00000055616 | Uncharacterized protein. | Matrilin 2. | 0.611 |
FZD6 | DKK1 | ENSMODP00000006959 | ENSMODP00000020512 | Frizzled class receptor 6; Belongs to the G-protein coupled receptor Fz/Smo family. | Dickkopf WNT signaling pathway inhibitor 1. | 0.411 |
FZD6 | MATN2 | ENSMODP00000006959 | ENSMODP00000055616 | Frizzled class receptor 6; Belongs to the G-protein coupled receptor Fz/Smo family. | Matrilin 2. | 0.863 |
FZD6 | NLK | ENSMODP00000006959 | ENSMODP00000052427 | Frizzled class receptor 6; Belongs to the G-protein coupled receptor Fz/Smo family. | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | 0.447 |
GATA3 | MATN2 | ENSMODP00000020895 | ENSMODP00000055616 | GATA binding protein 3. | Matrilin 2. | 0.479 |
LUM | DCN | ENSMODP00000012084 | ENSMODP00000012070 | Lumican. | Decorin; May affect the rate of fibrils formation. | 0.922 |
LUM | MATN2 | ENSMODP00000012084 | ENSMODP00000055616 | Lumican. | Matrilin 2. | 0.690 |
MATN2 | CST7 | ENSMODP00000055616 | ENSMODP00000053188 | Matrilin 2. | Cystatin domain-containing protein. | 0.489 |
MATN2 | DCN | ENSMODP00000055616 | ENSMODP00000012070 | Matrilin 2. | Decorin; May affect the rate of fibrils formation. | 0.474 |
MATN2 | DKK1 | ENSMODP00000055616 | ENSMODP00000020512 | Matrilin 2. | Dickkopf WNT signaling pathway inhibitor 1. | 0.541 |
MATN2 | ENSMODP00000049103 | ENSMODP00000055616 | ENSMODP00000049103 | Matrilin 2. | Uncharacterized protein. | 0.611 |
MATN2 | FZD6 | ENSMODP00000055616 | ENSMODP00000006959 | Matrilin 2. | Frizzled class receptor 6; Belongs to the G-protein coupled receptor Fz/Smo family. | 0.863 |
MATN2 | GATA3 | ENSMODP00000055616 | ENSMODP00000020895 | Matrilin 2. | GATA binding protein 3. | 0.479 |
MATN2 | LUM | ENSMODP00000055616 | ENSMODP00000012084 | Matrilin 2. | Lumican. | 0.690 |
MATN2 | NIPAL2 | ENSMODP00000055616 | ENSMODP00000008107 | Matrilin 2. | NIPA like domain containing 2. | 0.539 |
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